To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("gcrma")

In most cases, you don't need to download the package archive at all.

gcrma

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see gcrma.

Background Adjustment Using Sequence Information

Bioconductor version: 3.2

Background adjustment using sequence information

Author: Jean(ZHIJIN) Wu, Rafael Irizarry with contributions from James MacDonald <jmacdon at med.umich.edu> Jeff Gentry

Maintainer: Z. Wu <zwu at stat.brown.edu>

Citation (from within R, enter citation("gcrma")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("gcrma")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gcrma")

biocViews	Microarray, OneChannel, Preprocessing, Software
Version	2.42.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 11 years)
License	LGPL
Depends	R (>= 2.6.0), affy(>= 1.23.2), graphics, methods, stats, utils
Imports	Biobase, affy(>= 1.23.2), affyio(>= 1.13.3), XVector, Biostrings(>= 2.11.32), splines, BiocInstaller
LinkingTo
Suggests	affydata, tools, splines, hgu95av2cdf, hgu95av2probe
SystemRequirements
Enhances
URL
Depends On Me	affyILM, affyPLM, bgx, maPredictDSC, maskBAD, simpleaffy, webbioc
Imports Me	affycoretools, affylmGUI, limmaGUI, simpleaffy
Suggests Me	AffyExpress, ArrayTools, BiocCaseStudies, panp
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	gcrma_2.42.0.tar.gz
Windows Binary	gcrma_2.42.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	gcrma_2.42.0.tgz
Mac OS X 10.9 (Mavericks)	gcrma_2.42.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/gcrma/tree/release-3.2
Package Short Url	http://bioconductor.org/packages/gcrma/
Package Downloads Report	Download Stats

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