To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("gQTLBase")

In most cases, you don't need to download the package archive at all.

gQTLBase

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see gQTLBase.

gQTLBase: infrastructure for eQTL, mQTL and similar studies

Bioconductor version: 3.2

Infrastructure for eQTL, mQTL and similar studies.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("gQTLBase")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("gQTLBase")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gQTLBase")

HTML		gQTLBase infrastructure for eQTL archives
PDF		Reference Manual

biocViews	Software
Version	1.2.1
In Bioconductor since	BioC 3.1 (R-3.2) (1 year)
License	Artistic-2.0
Depends
Imports	GenomicRanges, methods, BatchJobs, BBmisc, S4Vectors, BiocGenerics, foreach, doParallel, bit, ff, rtracklayer, ffbase, GenomicFiles
LinkingTo
Suggests	geuvStore, knitr, rmarkdown, BiocStyle, RUnit, GGtools, Homo.sapiens, IRanges, erma, GenomeInfoDb, gwascat, geuvPack
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	geuvStore, gQTLstats
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	gQTLBase_1.2.1.tar.gz
Windows Binary	gQTLBase_1.2.1.zip
Mac OS X 10.6 (Snow Leopard)	gQTLBase_1.2.0.tgz
Mac OS X 10.9 (Mavericks)	gQTLBase_1.2.1.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/gQTLBase/tree/release-3.2
Package Short Url	http://bioconductor.org/packages/gQTLBase/
Package Downloads Report	Download Stats

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