prebsdata

DOI: 10.18129/B9.bioc.prebsdata    

Data for 'prebs' package

Bioconductor version: Release (3.6)

This package contains data required to run examples in 'prebs' package. The data files include: 1) Small sample bam files for demonstration purposes 2) Probe sequence mappings for Custom CDF (taken from http://brainarray.mbni.med.umich.edu/brainarray/Database/CustomCDF/genomic_curated_CDF.asp) 3) Probe sequence mappings for manufacturer's CDF (manually created using bowtie)

Author: Karolis Uziela and Antti Honkela

Maintainer: Karolis Uziela <karolis.uziela at scilifelab.se>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("prebsdata")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("prebsdata")

 

PDF		prebsdata User Guide
PDF		Reference Manual

Details

biocViews	ExperimentData, RNASeqData, SequencingData
Version	1.14.0
License	Artistic-2.0
Depends	R (>= 2.14.0)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	prebs, SigFuge
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	prebsdata_1.14.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/prebsdata
Package Short Url	http://bioconductor.org/packages/prebsdata/
Package Downloads Report	Download Stats