DREAM4

DOI: 10.18129/B9.bioc.DREAM4    

Synthetic Expression Data for Gene Regulatory Network Inference from the 2009 DREAM4 challenge

Bioconductor version: Release (3.6)

Simulated expression data for five 10-node, and five 100-node networks, with associated data (including solutions) from the 2009 DREAM4 challenge.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at systemsbiology.org>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DREAM4")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DREAM4")

 

PDF	R Script	DREAM4 Overview
PDF		DREAM4_InSilico_Description.pdf
PDF		Reference Manual

Details

biocViews	ExperimentData, Genome, Saccharomyces_cerevisiae_Data, SequencingData
Version	1.14.0
License	GPL
Depends	R (>= 2.15.1), SummarizedExperiment
Imports
LinkingTo
Suggests	RUnit, networkBMA
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	DREAM4_1.14.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/DREAM4
Package Short Url	http://bioconductor.org/packages/DREAM4/
Package Downloads Report	Download Stats