ncdfFlow

DOI: 10.18129/B9.bioc.ncdfFlow    

ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.

Bioconductor version: Release (3.6)

Provides HDF5 storage based methods and functions for manipulation of flow cytometry data.

Author: Mike Jiang,Greg Finak,N. Gopalakrishnan

Maintainer: Mike Jiang <wjiang2 at fhcrc.org>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ncdfFlow")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ncdfFlow")

 

PDF	R Script	Basic Functions for Flow Cytometry Data
PDF		Reference Manual
Text		README
Text		NEWS

Details

biocViews	FlowCytometry, Software
Version	2.24.0
In Bioconductor since	BioC 2.9 (R-2.14) (6.5 years)
License	Artistic-2.0
Depends	R (>= 2.14.0), flowCore(>= 1.37.15), RcppArmadillo, methods, BH
Imports	Biobase, BiocGenerics, flowCore, flowViz, zlibbioc
LinkingTo	Rcpp, RcppArmadillo, BH, Rhdf5lib
Suggests	testthat, parallel
SystemRequirements
Enhances
URL
Depends On Me	flowStats, flowWorkspace, ggcyto, QUALIFIER
Imports Me	CytoML, openCyto
Suggests Me	COMPASS, cydar
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ncdfFlow_2.24.0.tar.gz
Windows Binary	ncdfFlow_2.24.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	ncdfFlow_2.24.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ncdfFlow
Package Short Url	http://bioconductor.org/packages/ncdfFlow/
Package Downloads Report	Download Stats