logicFS

DOI: 10.18129/B9.bioc.logicFS    

Identification of SNP Interactions

Bioconductor version: Release (3.6)

Identification of interactions between binary variables using Logic Regression. Can, e.g., be used to find interesting SNP interactions. Contains also a bagging version of logic regression for classification.

Author: Holger Schwender

Maintainer: Holger Schwender <holger.schw at gmx.de>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("logicFS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("logicFS")

 

PDF	R Script	logicFS Manual
PDF		Reference Manual

Details

biocViews	Classification, Genetics, SNP, Software
Version	1.48.0
In Bioconductor since	BioC 1.8 (R-2.3) (12 years)
License	LGPL (>= 2)
Depends	LogicReg, mcbiopi
Imports
LinkingTo
Suggests	genefilter, siggenes
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	trio
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	logicFS_1.48.0.tar.gz
Windows Binary	logicFS_1.48.0.zip
Mac OS X 10.11 (El Capitan)	logicFS_1.48.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/logicFS
Package Short Url	http://bioconductor.org/packages/logicFS/
Package Downloads Report	Download Stats