GRmetrics

DOI: 10.18129/B9.bioc.GRmetrics    

Calculate growth-rate inhibition (GR) metrics

Bioconductor version: Release (3.6)

Functions for calculating and visualizing growth-rate inhibition (GR) metrics.

Author: Nicholas Clark

Maintainer: Nicholas Clark <nicholas.clark00 at gmail.com>, Mario Medvedovic <medvedm at ucmail.uc.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GRmetrics")

Documentation

HTML	R Script	GRmetrics: an R package for calculation and visualization of dose-response metrics based on growth rate inhibition
PDF		Reference Manual
Text		NEWS

Details

biocViews	CellBasedAssays, CellBiology, Software, TimeCourse, Visualization
Version	1.4.1
In Bioconductor since	BioC 3.4 (R-3.3) (1.5 years)
License	GPL-3
Depends	R (>= 3.3), SummarizedExperiment
Imports	drc, plotly, ggplot2, S4Vectors
LinkingTo
Suggests	knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL	https://github.com/uc-bd2k/GRmetrics
BugReports	https://github.com/uc-bd2k/GRmetrics/issues
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	GRmetrics_1.4.1.tar.gz
Windows Binary	GRmetrics_1.4.1.zip
Mac OS X 10.11 (El Capitan)	GRmetrics_1.4.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/GRmetrics
Package Short Url	http://bioconductor.org/packages/GRmetrics/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.6	Source Archive