CancerInSilico

DOI: 10.18129/B9.bioc.CancerInSilico    

An R interface for computational modeling of tumor progression

Bioconductor version: Release (3.6)

The CancerInSilico package provides an R interface for running mathematical models of tumor progresson. This package has the underlying models implemented in C++ and the output and analysis features implemented in R.

Author: Thomas D. Sherman, Raymond Cheng, Elana J. Fertig

Maintainer: Thomas D. Sherman <tsherma4 at jhu.edu>, Elana J. Fertig <ejfertig at jhmi.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CancerInSilico")

Documentation

HTML	R Script	The CancerInSilico Package
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	BiomedicalInformatics, CellBiology, MathematicalBiology, Software, SystemsBiology
Version	1.4.0
In Bioconductor since	BioC 3.4 (R-3.3) (1.5 years)
License	GPL (>= 2)
Depends	Rcpp
Imports	methods, grDevices, graphics, stats
LinkingTo	Rcpp, testthat, BH
Suggests	testthat, knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	CancerInSilico_1.4.0.tar.gz
Windows Binary	CancerInSilico_1.4.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	CancerInSilico_1.4.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/CancerInSilico
Package Short Url	http://bioconductor.org/packages/CancerInSilico/
Package Downloads Report	Download Stats