Cairns J, Freire-Pritchett P, Wingett SW, Dimond A, Plagnol V, Zerbino D, Schoenfelder S, Javierre B, Osborne C, Fraser P and Spivakov M (2015). “CHiCAGO: Robust Detection of DNA Looping Interactions in Capture Hi-C data.” BioRxiv. R package version 3.3.0.