Bolstad BM (2004). Low Level Analysis of High-density Oligonucleotide Array Data: Background, Normalization and Summarization. Ph.D. thesis, University of California, Berkeley.

Bolstad BM, Collin F, Brettschneider J, Simpson K, Cope L, Irizarry RA, Speed TP (2005). “Quality Assessment of Affymetrix GeneChip Data.” In Gentleman R, Carey V, Huber W, Irizarry R, Dudoit S (eds.), Bioinformatics and Computational Biology Solutions using R and Bioconductor, chapter 3, 33–47. Springer, New York.

Brettschneider J, Collin F, Bolstad BM, Speed TP (2007). “Quality assessment for short oligonucleotide arrays.” Technometrics, In press.