To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TimerQuant")

In most cases, you don't need to download the package archive at all.

TimerQuant

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see TimerQuant.

Timer Quantification

Bioconductor version: 3.2

Supplementary Data package for tandem timer methods paper by Barry et al. (2015) including TimerQuant shiny applications.

Author: Joseph Barry

Maintainer: Joseph Barry <joseph.barry at embl.de>

Citation (from within R, enter citation("TimerQuant")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TimerQuant")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TimerQuant")

PDF		Supplementary Methods - automatic generation of paper figures
PDF		Supplementary Methods - mathematical derivations
PDF		Reference Manual

biocViews	Danio_rerio_Data, ExperimentData, HighThroughputImagingData, Tissue
Version	1.0.0
License	Artistic-2.0
Depends	shiny
Imports	ggplot2, grid, gridExtra, deSolve, dplyr, locfit
LinkingTo
Suggests	BiocStyle, reshape2, knitr, shinyBS
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	TimerQuant_1.0.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Package Short Url	http://bioconductor.org/packages/TimerQuant/
Package Downloads Report	Download Stats

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