To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("phastCons100way.UCSC.hg38")
In most cases, you don't need to download the package archive at all.
This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see phastCons100way.UCSC.hg38.
Bioconductor version: 3.2
Store UCSC phastCons conservation scores for the human genome (hg38) calculated from multiple alignments with other 99 vertebrate species.
Author: Robert Castelo
Maintainer: Robert Castelo <robert.castelo at upf.edu>
Citation (from within R,
enter citation("phastCons100way.UCSC.hg38")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("phastCons100way.UCSC.hg38")
Reference Manual | ||
Text | NEWS |
biocViews | AnnotationData, Genetics, Homo_sapiens, PhastConsDb |
Version | 3.2.0 |
License | Artistic-2.0 |
Depends | R (>= 3.0.0), VariantFiltering(>= 1.5.24) |
Imports | utils, IRanges, GenomicRanges, BSgenome |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
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Follow Installation instructions to use this package in your R session.
Package Source | phastCons100way.UCSC.hg38_3.2.0.tar.gz |
Windows Binary | |
Mac OS X 10.6 (Snow Leopard) | |
Mac OS X 10.9 (Mavericks) | |
Package Short Url | http://bioconductor.org/packages/phastCons100way.UCSC.hg38/ |
Package Downloads Report | Download Stats |
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