To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Ptroglodytes.UCSC.panTro2")

In most cases, you don't need to download the package archive at all.

BSgenome.Ptroglodytes.UCSC.panTro2

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Ptroglodytes.UCSC.panTro2.

Full genome sequences for Pan troglodytes (UCSC version panTro2)

Bioconductor version: 3.2

Full genome sequences for Pan troglodytes (Chimp) as provided by UCSC (panTro2, Mar. 2006) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Ptroglodytes.UCSC.panTro2")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Ptroglodytes.UCSC.panTro2")


PDF		Reference Manual

biocViews	AnnotationData, BSgenome, Genetics, Pan_troglodytes
Version	1.4.0
License	Artistic-2.0
Depends	BSgenome(>= 1.33.5)
Imports	BSgenome
LinkingTo
Suggests	GenomicFeatures
SystemRequirements
Enhances
URL
Depends On Me	BSgenome.Ptroglodytes.UCSC.panTro2.masked
Imports Me	BSgenome.Ptroglodytes.UCSC.panTro2.masked
Suggests Me

Follow Installation instructions to use this package in your R session.

Package Source	BSgenome.Ptroglodytes.UCSC.panTro2_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Package Short Url	http://bioconductor.org/packages/BSgenome.Ptroglodytes.UCSC.panTro2/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: