To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("plier")
In most cases, you don't need to download the package archive at all.
plier
|
This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see plier.
Implements the Affymetrix PLIER algorithm
Bioconductor version: 3.2
The PLIER (Probe Logarithmic Error Intensity Estimate) method produces an improved signal by accounting for experimentally observed patterns in probe behavior and handling error at the appropriately at low and high signal values.
Author: Affymetrix Inc., Crispin J Miller, PICR
Maintainer: Crispin Miller <cmiller at picr.man.ac.uk>
Citation (from within R,
enter citation("plier")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("plier")
Documentation
| Reference Manual | ||
| Text | README |
Details
| biocViews | Software |
| Version | 1.40.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 11 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.0), methods |
| Imports | affy, Biobase, methods |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | piano |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | plier_1.40.0.tar.gz |
| Windows Binary | plier_1.40.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | plier_1.40.0.tgz |
| Mac OS X 10.9 (Mavericks) | plier_1.40.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/plier/tree/release-3.2 |
| Package Short Url | http://bioconductor.org/packages/plier/ |
| Package Downloads Report | Download Stats |
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