To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dagLogo")

In most cases, you don't need to download the package archive at all.

dagLogo

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see dagLogo.

Bioconductor version: 3.2

Visualize significant conserved amino acid sequence pattern in groups based on probability theory.

Author: Jianhong Ou, Alexey Stukalov, Niraj Nirala, Usha Acharya, Lihua Julie Zhu

Maintainer: Jianhong Ou <jianhong.ou at umassmed.edu>

Citation (from within R, enter citation("dagLogo")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dagLogo")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("dagLogo")

biocViews	SequenceMatching, Software, Visualization
Version	1.8.0
In Bioconductor since	BioC 2.13 (R-3.0) (2.5 years)
License	GPL (>=2)
Depends	R (>= 3.0.1), methods, biomaRt, grImport, grid, motifStack
Imports	pheatmap, Biostrings
LinkingTo
Suggests	XML, UniProt.ws, RUnit, BiocGenerics, BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	dagLogo_1.8.0.tar.gz
Windows Binary	dagLogo_1.8.0.zip
Mac OS X 10.6 (Snow Leopard)	dagLogo_1.8.0.tgz
Mac OS X 10.9 (Mavericks)	dagLogo_1.8.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/dagLogo/tree/release-3.2
Package Short Url	http://bioconductor.org/packages/dagLogo/
Package Downloads Report	Download Stats

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