To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SVM2CRM")

In most cases, you don't need to download the package archive at all.

SVM2CRM

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see SVM2CRM.

SVM2CRM: support vector machine for cis-regulatory elements detections

Bioconductor version: 3.2

Detection of cis-regulatory elements using svm implemented in LiblineaR.

Author: Guidantonio Malagoli Tagliazucchi <malagoli at ingm.org>

Maintainer: Guidantonio Malagoli Tagliazucchi <guidantonio.malagolitagliazucchi at unimore.it>

Citation (from within R, enter citation("SVM2CRM")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SVM2CRM")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SVM2CRM")

biocViews	ChIPSeq, ChipOnChip, Preprocessing, Software, SupportVectorMachine
Version	1.2.0
In Bioconductor since	BioC 3.1 (R-3.2) (1 year)
License	GPL-3
Depends	R (>= 3.2.0), LiblineaR, SVM2CRMdata
Imports	AnnotationDbi, mclust, GenomicRanges, IRanges, zoo, squash, pls, rtracklayer, ROCR, verification
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
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Build Report

Follow Installation instructions to use this package in your R session.

Package Source	SVM2CRM_1.2.0.tar.gz
Windows Binary	SVM2CRM_1.2.0.zip
Mac OS X 10.6 (Snow Leopard)	SVM2CRM_1.2.0.tgz
Mac OS X 10.9 (Mavericks)	SVM2CRM_1.2.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/SVM2CRM/tree/release-3.2
Package Short Url	http://bioconductor.org/packages/SVM2CRM/
Package Downloads Report	Download Stats

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