To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GeneBreak")

In most cases, you don't need to download the package archive at all.

GeneBreak

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see GeneBreak.

Gene Break Detection

Bioconductor version: 3.2

Recurrent breakpoint gene detection on copy number aberration profiles.

Author: Evert van den Broek, Stef van Lieshout

Maintainer: Evert van den Broek <vandenbroek.evert at gmail.com>

Citation (from within R, enter citation("GeneBreak")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GeneBreak")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GeneBreak")

biocViews	CopyNumberVariation, DNASeq, Genetics, Sequencing, Software, Visualization, WholeGenome, aCGH
Version	1.0.0
In Bioconductor since	BioC 3.2 (R-3.2) (0.5 years)
License	GPL-2
Depends	R (>= 3.2), QDNAseq, CGHcall, CGHbase, GenomicRanges
Imports	graphics, methods
LinkingTo
Suggests
SystemRequirements
Enhances
URL	https://github.com/stefvanlieshout/GeneBreak
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	GeneBreak_1.0.0.tar.gz
Windows Binary	GeneBreak_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)	GeneBreak_1.0.0.tgz
Mac OS X 10.9 (Mavericks)	GeneBreak_1.0.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/GeneBreak/tree/release-3.2
Package Short Url	http://bioconductor.org/packages/GeneBreak/
Package Downloads Report	Download Stats

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