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| YAPSA::YAPSA | 1. Usage of YAPSA | HTML | source | R code | |
| YAPSA::vignette_signature_specific_cutoffs | 2. Signature analysis with signature-specific cutoffs | HTML | source | R code | |
| YAPSA::vignette_confidenceIntervals | 3. Confidence Intervals | HTML | source | R code | |
| YAPSA::vignette_stratifiedAnalysis | 4. Stratified Analysis of Mutational Signatures | HTML | source | R code | |
| YAPSA::vignettes_Indel | 5. Indel signature analysis | HTML | source | R code | |
| YAPSA::vignette_exomes | 6. Usage of YAPSA for WES data | HTML | source | R code |