geneClassifiers

DOI: 10.18129/B9.bioc.geneClassifiers    

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see geneClassifiers.

Application of gene classifiers

Bioconductor version: 3.15

This packages aims for easy accessible application of classifiers which have been published in literature using an ExpressionSet as input.

Author: R Kuiper [cre, aut]

Maintainer: R Kuiper <r.kuiper.emc at gmail.com>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("geneClassifiers")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneClassifiers")

 

PDF		geneClassifiers and missing probesets
PDF	R Script	geneClassifiers introduction
PDF		Reference Manual
Text		NEWS

Details

biocViews	BiomedicalInformatics, Classification, GeneExpression, Microarray, Software, Survival
Version	1.20.0
In Bioconductor since	BioC 3.5 (R-3.4) (5.5 years)
License	GPL-2
Depends	R (>= 3.6.0)
Imports	utils, methods, stats, Biobase, BiocGenerics
LinkingTo
Suggests	testthat
SystemRequirements
Enhances
URL	https://doi.org/doi:10.18129/B9.bioc.geneClassifiers
BugReports	https://github.com/rkuiper/geneClassifiers/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	geneClassifiers_1.20.0.tar.gz
Windows Binary	geneClassifiers_1.20.0.zip
macOS Binary (x86_64)	geneClassifiers_1.20.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/geneClassifiers
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/geneClassifiers
Package Short Url	https://bioconductor.org/packages/geneClassifiers/
Package Downloads Report	Download Stats