To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GGBase")

In most cases, you don't need to download the package archive at all.

GGBase

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see GGBase.

GGBase infrastructure for genetics of gene expression package GGtools

Bioconductor version: 3.0

infrastructure

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("GGBase")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GGBase")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GGBase")

PDF	R Script	GGBase -- infrastructure for GGtools, genetics of gene expression
PDF		Reference Manual
Text		NEWS

biocViews	Genetics, Infrastructure, Software
Version	3.28.0
In Bioconductor since	BioC 2.2 (R-2.7) (8 years)
License	Artistic-2.0
Depends	R (>= 2.14), methods, snpStats
Imports	limma, genefilter, Biobase, BiocGenerics, Matrix, AnnotationDbi, digest, GenomicRanges
LinkingTo
Suggests	GGtools, illuminaHumanv1.db
SystemRequirements
Enhances
URL
Depends On Me	ceu1kg, ceu1kgv, ceuhm3, dsQTL, encoDnaseI, GGdata, GGtools, hmyriB36, yri1kgv
Imports Me
Suggests Me	ind1KG
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	GGBase_3.28.0.tar.gz
Windows Binary	GGBase_3.28.0.zip
Mac OS X 10.6 (Snow Leopard)	GGBase_3.28.0.tgz
Mac OS X 10.9 (Mavericks)	GGBase_3.28.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/GGBase/tree/release-3.0
Package Short Url	http://bioconductor.org/packages/GGBase/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: