foodingraph: Food Network Inference and Visualization
Displays a weighted undirected food graph from an adjacency matrix.
Can perform confidence-interval bootstrap inference with mutual information
or maximal information coefficient.
Based on my Master 1 internship at the Bordeaux Population Health center.
References : Reshef et al. (2011) <doi:10.1126/science.1205438>,
Meyer et al. (2008) <doi:10.1186/1471-2105-9-461>,
Liu et al. (2016) <doi:10.1371/journal.pone.0158247>.
| Version: |
0.1.0 |
| Imports: |
dplyr, ggplot2, cowplot, magrittr, stringr, tibble, tidyr, viridis, igraph, ggraph, minerva, rlang, labeling, grid |
| Suggests: |
knitr, infotheo, minet |
| Published: |
2019-10-06 |
| DOI: |
10.32614/CRAN.package.foodingraph |
| Author: |
Victor Gasque [cre, aut],
Boris Hejblum [aut],
Cecilia Samieri [aut] |
| Maintainer: |
Victor Gasque <victor.gasque at protonmail.com> |
| BugReports: |
https://github.com/vgasque/foodingraph/issues |
| License: |
GPL-3 |
| URL: |
https://github.com/vgasque/foodingraph/ |
| NeedsCompilation: |
no |
| Materials: |
NEWS |
| CRAN checks: |
foodingraph results |
Documentation:
Downloads:
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