eHDPrep: Quality Control and Semantic Enrichment of Datasets
A tool for the preparation and enrichment of health datasets for analysis (Toner et al. (2023) <doi:10.1093/gigascience/giad030>). Provides functionality for assessing data quality and for improving the reliability and machine interpretability of a dataset. 'eHDPrep' also enables semantic enrichment of a dataset where metavariables are discovered from the relationships between input variables determined from user-provided ontologies.
| Version: | 1.3.3 |
| Depends: | R (≥ 3.6.0) |
| Imports: | ggplot2 (≥ 3.3.3), dplyr (≥ 1.1.0), forcats (≥ 0.5.0), stringr (≥ 1.4.0), purrr (≥ 0.3.4), tidyr (≥ 1.1.2), kableExtra (≥ 1.3.1), magrittr (≥ 2.0.1), tibble (≥ 3.0.5), scales (≥ 1.1.1), rlang (≥ 0.4.10), quanteda (≥ 2.1.2), tm (≥ 0.7-8), pheatmap (≥ 1.0.12), igraph (≥ 1.2.6), tidygraph (≥ 1.2.0), readr (≥ 1.4.0), readxl (≥ 1.3.1), knitr (≥ 1.31) |
| Suggests: | testthat (≥ 2.1.0), ggraph (≥ 2.0.5) |
| Published: | 2023-06-05 |
| DOI: | 10.32614/CRAN.package.eHDPrep |
| Author: | Tom Toner  [aut],
Ian Overton [aut,
cre] |
| Maintainer: | Ian Overton <I.Overton at qub.ac.uk> |
| BugReports: | https://github.com/overton-group/eHDPrep/issues |
| License: | GPL-3 |
| URL: | https://github.com/overton-group/eHDPrep |
| NeedsCompilation: | no |
| Citation: | eHDPrep citation info |
| Materials: | NEWS |
| CRAN checks: | eHDPrep results |
Documentation:
| Reference manual: | eHDPrep.pdf |
| Vignettes: |
Introduction to eHDPrep |
Downloads:
| Package source: | eHDPrep_1.3.3.tar.gz |
| Windows binaries: | r-devel: eHDPrep_1.3.3.zip, r-release: eHDPrep_1.3.3.zip, r-oldrel: eHDPrep_1.3.3.zip |
| macOS binaries: | r-release (arm64): eHDPrep_1.3.3.tgz, r-oldrel (arm64): eHDPrep_1.3.3.tgz, r-release (x86_64): eHDPrep_1.3.3.tgz, r-oldrel (x86_64): eHDPrep_1.3.3.tgz |
| Old sources: | eHDPrep archive |
Linking:
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