biogrowth: Modelling of Population Growth

Modelling of population growth under static and dynamic environmental conditions. Includes functions for model fitting and making prediction under isothermal and dynamic conditions. The methods (algorithms & models) are based on predictive microbiology (See Perez-Rodriguez and Valero (2012, ISBN:978-1-4614-5519-6)).

Version:	1.0.4
Depends:	R (≥ 2.10)
Imports:	deSolve (≥ 1.28), tibble (≥ 3.0.3), dplyr (≥ 0.8.5), FME (≥ 1.3.6), MASS (≥ 7.3), rlang (≥ 0.4.7), purrr (≥ 0.3.4), ggplot2 (≥ 3.3.2), cowplot (≥ 1.0.0), lamW (≥ 1.3.0), tidyr (≥ 1.0.2), formula.tools (≥ 1.7.1), lifecycle
Suggests:	knitr, rmarkdown, tidyverse (≥ 1.3.0)
Published:	2024-04-29
DOI:	10.32614/CRAN.package.biogrowth
Author:	Alberto Garre [aut, cre], Jeroen Koomen [aut], Heidy den Besten [aut], Marcel Zwietering [aut]
Maintainer:	Alberto Garre <garre.alberto at gmail.com>
License:	GPL-3
NeedsCompilation:	no
Citation:	biogrowth citation info
Materials:	NEWS
In views:	Environmetrics
CRAN checks:	biogrowth results

Documentation:

Reference manual:	biogrowth.pdf
Vignettes:	Growth predictions in biogrowth Fitting growth models in biogrowth Including uncertainty in growth predictions in biogrowth Comparing growth models v05_custom_stochastic Modelling approach Description of datasets About the units of the growth rate (mu) Advanced plotting options in biogrowth Modelling constant environmental conditions using secondary models Deprecated and superseded functions

Downloads:

Package source:	biogrowth_1.0.4.tar.gz
Windows binaries:	r-devel: biogrowth_1.0.4.zip, r-release: biogrowth_1.0.4.zip, r-oldrel: biogrowth_1.0.4.zip
macOS binaries:	r-release (arm64): biogrowth_1.0.4.tgz, r-oldrel (arm64): biogrowth_1.0.4.tgz, r-release (x86_64): biogrowth_1.0.4.tgz, r-oldrel (x86_64): biogrowth_1.0.4.tgz
Old sources:	biogrowth archive

Linking:

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